Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 CCR12P-201ENST00000446203 998 ntBASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 CA15P1-201ENST00000481698 905 ntBASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP1Q96SZ6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 AC116562.4-202ENST00000641738 218 ntBASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK5RAP1Q96SZ6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDK5RAP1Q96SZ6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 KRT8P11-201ENST00000409686 1436 ntBASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms