Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE2Q96FN4 TFP1-202ENST00000475455 1573 ntBASIC16.72■□□□□ 0.27
CPNE2Q96FN4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 BX276092.2-201ENST00000417668 665 ntBASIC16.72■□□□□ 0.27
CPNE2Q96FN4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 AC022517.1-201ENST00000592429 346 ntBASIC16.72■□□□□ 0.27
CPNE2Q96FN4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 AC005082.1-201ENST00000413042 2259 ntBASIC16.72■□□□□ 0.27
CPNE2Q96FN4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE2Q96FN4 LTB4R2-202ENST00000528054 3092 ntBASIC16.71■□□□□ 0.27
CPNE2Q96FN4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 AL137784.2-201ENST00000607332 1000 ntBASIC16.71■□□□□ 0.27
CPNE2Q96FN4 AC080038.1-201ENST00000611274 1154 ntBASIC16.71■□□□□ 0.27
CPNE2Q96FN4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE2Q96FN4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPNE2Q96FN4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CPNE2Q96FN4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CPNE2Q96FN4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms