Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.25□□□□□ -0.13
RNF183Q96D59 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RNF183Q96D59 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RNF183Q96D59 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.25□□□□□ -0.13
RNF183Q96D59 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.25□□□□□ -0.13
RNF183Q96D59 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.25□□□□□ -0.13
RNF183Q96D59 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.25□□□□□ -0.13
RNF183Q96D59 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.25□□□□□ -0.13
RNF183Q96D59 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.25□□□□□ -0.13
RNF183Q96D59 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.25□□□□□ -0.13
RNF183Q96D59 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF183Q96D59 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 AC211429.1-201ENST00000415277 523 ntBASIC14.24□□□□□ -0.13
RNF183Q96D59 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.24□□□□□ -0.13
RNF183Q96D59 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF183Q96D59 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 LINC01023-201ENST00000606054 436 ntBASIC14.24□□□□□ -0.13
RNF183Q96D59 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 AP001271.2-201ENST00000624018 1556 ntBASIC14.24□□□□□ -0.13
RNF183Q96D59 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RNF183Q96D59 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF183Q96D59 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF183Q96D59 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.23□□□□□ -0.13
RNF183Q96D59 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
RNF183Q96D59 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF183Q96D59 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF183Q96D59 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF183Q96D59 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.23□□□□□ -0.13
RNF183Q96D59 TSPY15P-201ENST00000457163 923 ntBASIC14.23□□□□□ -0.13
RNF183Q96D59 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF183Q96D59 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.23□□□□□ -0.13
RNF183Q96D59 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.23□□□□□ -0.13
RNF183Q96D59 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 AL445675.2-201ENST00000620291 557 ntBASIC14.23□□□□□ -0.13
RNF183Q96D59 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 AL031985.4-201ENST00000642138 673 ntBASIC14.23□□□□□ -0.13
RNF183Q96D59 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.23□□□□□ -0.13
RNF183Q96D59 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RNF183Q96D59 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RNF183Q96D59 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF183Q96D59 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNF183Q96D59 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF183Q96D59 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms