Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 AC090164.3-201ENST00000610780 2143 ntBASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 AL390961.4-201ENST00000623958 2535 ntBASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB3IL1Q8TBN0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3IL1Q8TBN0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 AC018553.1-201ENST00000616682 1458 ntBASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 KRT18P61-201ENST00000585825 1298 ntBASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms