Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM2Q8N967 AL162741.1-201ENST00000565563 1558 ntBASIC15.74■□□□□ 0.11
LRTM2Q8N967 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM2Q8N967 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM2Q8N967 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRTM2Q8N967 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRTM2Q8N967 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRTM2Q8N967 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 AC073592.3-201ENST00000625118 1834 ntBASIC15.73■□□□□ 0.11
LRTM2Q8N967 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRTM2Q8N967 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM2Q8N967 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 AL589743.5-201ENST00000616611 1050 ntBASIC15.72■□□□□ 0.11
LRTM2Q8N967 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 LTB4R2-202ENST00000528054 3092 ntBASIC15.72■□□□□ 0.11
LRTM2Q8N967 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRTM2Q8N967 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM2Q8N967 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
LRTM2Q8N967 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM2Q8N967 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.71■□□□□ 0.1
LRTM2Q8N967 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRTM2Q8N967 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRTM2Q8N967 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRTM2Q8N967 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.7■□□□□ 0.1
LRTM2Q8N967 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.7■□□□□ 0.1
LRTM2Q8N967 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM2Q8N967 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms