Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF440Q8IYI8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF440Q8IYI8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 AC124016.1-201ENST00000609552 612 ntBASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 HLA-A-209ENST00000638375 975 ntBASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 AC073648.6-201ENST00000641589 218 ntBASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF440Q8IYI8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 POU5F1P3-201ENST00000428824 1078 ntBASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TSPY21P-201ENST00000433481 731 ntBASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF440Q8IYI8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms