Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 AL031985.4-201ENST00000642138 673 ntBASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCUBE3Q8IX30 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCUBE3Q8IX30 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCUBE3Q8IX30 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.27■□□□□ 0.83
SCUBE3Q8IX30 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCUBE3Q8IX30 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SCUBE3Q8IX30 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 TSPY7P-201ENST00000431358 1114 ntBASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 Z85996.1-201ENST00000494644 937 ntBASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
SCUBE3Q8IX30 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 FAM210CP-201ENST00000445714 574 ntBASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCUBE3Q8IX30 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 KRT8P41-201ENST00000533985 1514 ntBASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 SNORA78-201ENST00000459373 127 ntBASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.24■□□□□ 0.83
SCUBE3Q8IX30 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms