Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 UNC93B3-201ENST00000308076 687 ntBASIC12.22□□□□□ -0.45
LINC00575Q6W349 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 KRT18P20-201ENST00000548986 1279 ntBASIC12.21□□□□□ -0.45
LINC00575Q6W349 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 AC027682.1-201ENST00000562846 899 ntBASIC12.21□□□□□ -0.45
LINC00575Q6W349 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LINC00575Q6W349 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00575Q6W349 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
LINC00575Q6W349 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC00575Q6W349 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 HLA-G-202ENST00000376815 851 ntBASIC12.2□□□□□ -0.46
LINC00575Q6W349 HLA-G-203ENST00000376818 1127 ntBASIC12.2□□□□□ -0.46
LINC00575Q6W349 NT5C3AP1-201ENST00000394500 1012 ntBASIC12.2□□□□□ -0.46
LINC00575Q6W349 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 AC024257.2-201ENST00000549699 147 ntBASIC12.2□□□□□ -0.46
LINC00575Q6W349 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 AP001160.3-201ENST00000601484 763 ntBASIC12.2□□□□□ -0.46
LINC00575Q6W349 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms