Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 AC131281.2-201ENST00000520478 145 ntBASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 AC011298.3-201ENST00000615796 283 ntBASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 AL031598.1-201ENST00000561511 1773 ntBASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP4Q6PIL6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KCNIP4Q6PIL6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 AC093525.10-201ENST00000625130 1569 ntBASIC14.9□□□□□ -0.02
KCNIP4Q6PIL6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 AC067852.2-201ENST00000590513 2313 ntBASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 SERBP1P1-201ENST00000396021 1160 ntBASIC14.89□□□□□ -0.03
KCNIP4Q6PIL6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms