Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF549Q6P9A3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 C1QL1P1-201ENST00000568105 661 ntBASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF549Q6P9A3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 AC004408.2-201ENST00000623613 2777 ntBASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 AC073648.6-201ENST00000641589 218 ntBASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF549Q6P9A3 AL020996.1-203ENST00000536896 2307 ntBASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms