Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 AC093503.3-201ENST00000624917 2352 ntBASIC19.62■□□□□ 0.73
CASC4Q6P4E1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.62■□□□□ 0.73
CASC4Q6P4E1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 AC083880.1-201ENST00000608266 535 ntBASIC19.62■□□□□ 0.73
CASC4Q6P4E1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 TEX21P-204ENST00000641479 1693 ntBASIC19.62■□□□□ 0.73
CASC4Q6P4E1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASC4Q6P4E1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 YBX1P10-201ENST00000444752 975 ntBASIC19.61■□□□□ 0.73
CASC4Q6P4E1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 SOX15-203ENST00000570788 1093 ntBASIC19.61■□□□□ 0.73
CASC4Q6P4E1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASC4Q6P4E1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 AL161938.1-201ENST00000569833 2180 ntBASIC19.6■□□□□ 0.73
CASC4Q6P4E1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms