Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 AC008040.2-201ENST00000461049 708 ntBASIC16.95■□□□□ 0.3
FREM1Q5H8C1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM1Q5H8C1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 AC007663.1-201ENST00000438948 1240 ntBASIC16.94■□□□□ 0.3
FREM1Q5H8C1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM1Q5H8C1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 MIR1224-201ENST00000408193 85 ntBASIC16.93■□□□□ 0.3
FREM1Q5H8C1 CRYGFP-201ENST00000418459 633 ntBASIC16.93■□□□□ 0.3
FREM1Q5H8C1 MFAP1P1-201ENST00000442257 1255 ntBASIC16.93■□□□□ 0.3
FREM1Q5H8C1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FREM1Q5H8C1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 AL032819.2-201ENST00000624543 2162 ntBASIC16.92■□□□□ 0.3
FREM1Q5H8C1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 RCN1P1-201ENST00000400413 996 ntBASIC16.92■□□□□ 0.3
FREM1Q5H8C1 AC113347.1-201ENST00000413321 391 ntBASIC16.92■□□□□ 0.3
FREM1Q5H8C1 SLC25A1P4-201ENST00000567977 778 ntBASIC16.92■□□□□ 0.3
FREM1Q5H8C1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 AC145285.6-201ENST00000604632 637 ntBASIC16.92■□□□□ 0.3
FREM1Q5H8C1 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.92■□□□□ 0.3
FREM1Q5H8C1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
FREM1Q5H8C1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms