Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 SPDYE15P-201ENST00000424157 909 ntBASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 VENTXP5-201ENST00000523979 775 ntBASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 ZNF444P1-201ENST00000559497 298 ntBASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
TRIM71Q2Q1W2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 AC104417.2-201ENST00000562989 1793 ntBASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 SPDYE13P-201ENST00000445314 798 ntBASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM71Q2Q1W2 AL391422.3-201ENST00000603791 2761 ntBASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM71Q2Q1W2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM71Q2Q1W2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM71Q2Q1W2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 AC069148.1-201ENST00000608741 768 ntBASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 CR769767.2-201ENST00000622735 460 ntBASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM71Q2Q1W2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 HCG4P8-203ENST00000443049 980 ntBASIC21■□□□□ 0.95
TRIM71Q2Q1W2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms