Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP3S2P59780 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3S2P59780 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3S2P59780 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.56■□□□□ 0.24
AP3S2P59780 TPRG1LP1-201ENST00000598702 760 ntBASIC16.56■□□□□ 0.24
AP3S2P59780 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
AP3S2P59780 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
AP3S2P59780 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
AP3S2P59780 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
AP3S2P59780 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3S2P59780 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3S2P59780 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
AP3S2P59780 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
AP3S2P59780 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 FP475955.4-201ENST00000623131 1990 ntBASIC16.55■□□□□ 0.24
AP3S2P59780 ABALON-201ENST00000629058 1903 ntBASIC16.55■□□□□ 0.24
AP3S2P59780 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 SLC7A5P2-201ENST00000553010 536 ntBASIC16.55■□□□□ 0.24
AP3S2P59780 AC012414.1-201ENST00000556676 535 ntBASIC16.55■□□□□ 0.24
AP3S2P59780 CCDC92B-201ENST00000575506 885 ntBASIC16.55■□□□□ 0.24
AP3S2P59780 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3S2P59780 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
AP3S2P59780 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
AP3S2P59780 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S2P59780 AL512353.2-201ENST00000448759 1962 ntBASIC16.55■□□□□ 0.24
AP3S2P59780 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
AP3S2P59780 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3S2P59780 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3S2P59780 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 RBM17P2-201ENST00000616397 1405 ntBASIC16.54■□□□□ 0.24
AP3S2P59780 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP3S2P59780 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 HLA-G-202ENST00000376815 851 ntBASIC16.54■□□□□ 0.24
AP3S2P59780 HLA-G-203ENST00000376818 1127 ntBASIC16.54■□□□□ 0.24
AP3S2P59780 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3S2P59780 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
AP3S2P59780 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 AC008764.7-201ENST00000593779 1081 ntBASIC16.54■□□□□ 0.24
AP3S2P59780 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3S2P59780 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S2P59780 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
AP3S2P59780 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP3S2P59780 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3S2P59780 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3S2P59780 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3S2P59780 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP3S2P59780 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.53■□□□□ 0.24
AP3S2P59780 AC027682.1-201ENST00000562846 899 ntBASIC16.53■□□□□ 0.24
AP3S2P59780 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.53■□□□□ 0.24
AP3S2P59780 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms