Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDH6P55285 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 FAM201B-201ENST00000458407 597 ntBASIC20.04■□□□□ 0.8
CDH6P55285 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH6P55285 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDH6P55285 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH6P55285 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH6P55285 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.04■□□□□ 0.8
CDH6P55285 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
CDH6P55285 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH6P55285 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH6P55285 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH6P55285 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH6P55285 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CDH6P55285 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH6P55285 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 C1QL1P1-201ENST00000568105 661 ntBASIC20.03■□□□□ 0.8
CDH6P55285 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDH6P55285 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH6P55285 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH6P55285 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH6P55285 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH6P55285 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CDH6P55285 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDH6P55285 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDH6P55285 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 RN7SL471P-201ENST00000580476 299 ntBASIC20.02■□□□□ 0.8
CDH6P55285 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH6P55285 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 AL161938.1-201ENST00000569833 2180 ntBASIC20.02■□□□□ 0.8
CDH6P55285 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDH6P55285 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH6P55285 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CDH6P55285 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CDH6P55285 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH6P55285 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.02■□□□□ 0.79
CDH6P55285 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDH6P55285 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDH6P55285 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH6P55285 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDH6P55285 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDH6P55285 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH6P55285 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH6P55285 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH6P55285 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDH6P55285 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.01■□□□□ 0.79
CDH6P55285 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH6P55285 TSPY20P-201ENST00000450910 630 ntBASIC20.01■□□□□ 0.79
CDH6P55285 AC128676.1-201ENST00000454392 318 ntBASIC20.01■□□□□ 0.79
CDH6P55285 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH6P55285 AC124016.1-201ENST00000609552 612 ntBASIC20.01■□□□□ 0.79
CDH6P55285 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDH6P55285 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH6P55285 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH6P55285 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms