Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
NEK3P51956 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
NEK3P51956 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.85■□□□□ 0.77
NEK3P51956 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.85■□□□□ 0.77
NEK3P51956 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.85■□□□□ 0.77
NEK3P51956 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.85■□□□□ 0.77
NEK3P51956 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK3P51956 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NEK3P51956 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK3P51956 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NEK3P51956 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK3P51956 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.85■□□□□ 0.77
NEK3P51956 AC018553.1-201ENST00000616682 1458 ntBASIC19.85■□□□□ 0.77
NEK3P51956 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEK3P51956 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.84■□□□□ 0.77
NEK3P51956 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.84■□□□□ 0.77
NEK3P51956 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NEK3P51956 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.84■□□□□ 0.77
NEK3P51956 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEK3P51956 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
NEK3P51956 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.84■□□□□ 0.77
NEK3P51956 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 TFP1-202ENST00000475455 1573 ntBASIC19.84■□□□□ 0.77
NEK3P51956 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.84■□□□□ 0.77
NEK3P51956 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.84■□□□□ 0.77
NEK3P51956 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NEK3P51956 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.84■□□□□ 0.77
NEK3P51956 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
NEK3P51956 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.84■□□□□ 0.77
NEK3P51956 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEK3P51956 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK3P51956 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NEK3P51956 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NEK3P51956 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
NEK3P51956 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK3P51956 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK3P51956 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK3P51956 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
NEK3P51956 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
NEK3P51956 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK3P51956 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NEK3P51956 TSPY7P-201ENST00000431358 1114 ntBASIC19.83■□□□□ 0.77
NEK3P51956 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEK3P51956 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.83■□□□□ 0.77
NEK3P51956 AF186192.3-201ENST00000583427 947 ntBASIC19.83■□□□□ 0.77
NEK3P51956 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.83■□□□□ 0.77
NEK3P51956 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.83■□□□□ 0.76
NEK3P51956 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK3P51956 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NEK3P51956 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NEK3P51956 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NEK3P51956 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK3P51956 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK3P51956 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.83■□□□□ 0.76
NEK3P51956 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NEK3P51956 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK3P51956 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK3P51956 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 KRT17P2-201ENST00000300992 1314 ntBASIC19.82■□□□□ 0.76
NEK3P51956 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.82■□□□□ 0.76
NEK3P51956 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.82■□□□□ 0.76
NEK3P51956 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NEK3P51956 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NEK3P51956 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.82■□□□□ 0.76
NEK3P51956 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEK3P51956 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.82■□□□□ 0.76
NEK3P51956 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.82■□□□□ 0.76
NEK3P51956 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK3P51956 MIR4785-201ENST00000585005 73 ntBASIC19.82■□□□□ 0.76
NEK3P51956 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms