Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLCNKAP51800 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCNKAP51800 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCNKAP51800 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCNKAP51800 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 TREX1-205ENST00000625293 1783 ntBASIC18.91■□□□□ 0.62
CLCNKAP51800 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCNKAP51800 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 AC008040.2-201ENST00000461049 708 ntBASIC18.91■□□□□ 0.62
CLCNKAP51800 AC091390.4-202ENST00000476426 537 ntBASIC18.91■□□□□ 0.62
CLCNKAP51800 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCNKAP51800 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLCNKAP51800 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCNKAP51800 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCNKAP51800 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCNKAP51800 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCNKAP51800 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCNKAP51800 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLCNKAP51800 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCNKAP51800 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCNKAP51800 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLCNKAP51800 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLCNKAP51800 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCNKAP51800 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCNKAP51800 MIR1238-201ENST00000408483 83 ntBASIC18.9■□□□□ 0.62
CLCNKAP51800 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLCNKAP51800 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCNKAP51800 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCNKAP51800 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCNKAP51800 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCNKAP51800 AC096733.2-201ENST00000609937 1394 ntBASIC18.9■□□□□ 0.62
CLCNKAP51800 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCNKAP51800 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLCNKAP51800 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCNKAP51800 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCNKAP51800 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.89■□□□□ 0.62
CLCNKAP51800 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLCNKAP51800 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCNKAP51800 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCNKAP51800 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLCNKAP51800 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 FAM207BP-201ENST00000447172 505 ntBASIC18.89■□□□□ 0.61
CLCNKAP51800 AC097488.1-201ENST00000507834 756 ntBASIC18.89■□□□□ 0.61
CLCNKAP51800 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLCNKAP51800 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCNKAP51800 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.89■□□□□ 0.61
CLCNKAP51800 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCNKAP51800 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCNKAP51800 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCNKAP51800 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCNKAP51800 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCNKAP51800 ZNF815P-204ENST00000434898 1737 ntBASIC18.88■□□□□ 0.61
CLCNKAP51800 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLCNKAP51800 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCNKAP51800 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCNKAP51800 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLCNKAP51800 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
CLCNKAP51800 AL158211.5-201ENST00000623583 2518 ntBASIC18.88■□□□□ 0.61
CLCNKAP51800 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCNKAP51800 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCNKAP51800 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCNKAP51800 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCNKAP51800 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 AC133561.5-201ENST00000635547 218 ntBASIC18.88■□□□□ 0.61
CLCNKAP51800 KRT8P41-201ENST00000533985 1514 ntBASIC18.88■□□□□ 0.61
CLCNKAP51800 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CLCNKAP51800 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCNKAP51800 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCNKAP51800 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLCNKAP51800 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCNKAP51800 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCNKAP51800 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLCNKAP51800 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCNKAP51800 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms