Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX6P35712 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX6P35712 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.27■□□□□ 0.36
SOX6P35712 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX6P35712 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SOX6P35712 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX6P35712 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.27■□□□□ 0.35
SOX6P35712 KRT16P6-202ENST00000425692 1426 ntBASIC17.27■□□□□ 0.35
SOX6P35712 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOX6P35712 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOX6P35712 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX6P35712 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOX6P35712 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX6P35712 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX6P35712 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOX6P35712 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.27■□□□□ 0.35
SOX6P35712 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SOX6P35712 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SOX6P35712 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 AC141586.3-201ENST00000562166 1838 ntBASIC17.26■□□□□ 0.35
SOX6P35712 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SOX6P35712 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 AC105265.2-201ENST00000467189 838 ntBASIC17.26■□□□□ 0.35
SOX6P35712 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SOX6P35712 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX6P35712 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SOX6P35712 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SOX6P35712 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX6P35712 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SOX6P35712 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX6P35712 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX6P35712 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SOX6P35712 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX6P35712 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SOX6P35712 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX6P35712 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX6P35712 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.25■□□□□ 0.35
SOX6P35712 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SOX6P35712 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX6P35712 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SOX6P35712 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SOX6P35712 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX6P35712 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX6P35712 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SOX6P35712 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX6P35712 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX6P35712 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SOX6P35712 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SOX6P35712 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX6P35712 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX6P35712 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX6P35712 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SOX6P35712 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.24■□□□□ 0.35
SOX6P35712 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX6P35712 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SOX6P35712 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX6P35712 AC105233.4-201ENST00000642045 216 ntBASIC17.24■□□□□ 0.35
SOX6P35712 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX6P35712 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX6P35712 PRORSD1P-202ENST00000563365 2154 ntBASIC17.23■□□□□ 0.35
SOX6P35712 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.23■□□□□ 0.35
SOX6P35712 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms