Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PEPDP12955 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PEPDP12955 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEPDP12955 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.82■□□□□ 0.44
PEPDP12955 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.82■□□□□ 0.44
PEPDP12955 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PEPDP12955 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEPDP12955 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PEPDP12955 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.81■□□□□ 0.44
PEPDP12955 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.81■□□□□ 0.44
PEPDP12955 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.81■□□□□ 0.44
PEPDP12955 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.81■□□□□ 0.44
PEPDP12955 AC004264.1-201ENST00000608354 794 ntBASIC17.81■□□□□ 0.44
PEPDP12955 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.81■□□□□ 0.44
PEPDP12955 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.81■□□□□ 0.44
PEPDP12955 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.81■□□□□ 0.44
PEPDP12955 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PEPDP12955 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 AP000974.1-201ENST00000623909 2387 ntBASIC17.81■□□□□ 0.44
PEPDP12955 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PEPDP12955 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.81■□□□□ 0.44
PEPDP12955 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PEPDP12955 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEPDP12955 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.8■□□□□ 0.44
PEPDP12955 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PEPDP12955 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PEPDP12955 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.8■□□□□ 0.44
PEPDP12955 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 TFP1-202ENST00000475455 1573 ntBASIC17.8■□□□□ 0.44
PEPDP12955 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.8■□□□□ 0.44
PEPDP12955 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PEPDP12955 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PEPDP12955 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.8■□□□□ 0.44
PEPDP12955 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.8■□□□□ 0.44
PEPDP12955 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.8■□□□□ 0.44
PEPDP12955 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.8■□□□□ 0.44
PEPDP12955 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
PEPDP12955 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PEPDP12955 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEPDP12955 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.79■□□□□ 0.44
PEPDP12955 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 MIR718-201ENST00000390190 70 ntBASIC17.79■□□□□ 0.44
PEPDP12955 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 AC008550.1-201ENST00000511500 884 ntBASIC17.79■□□□□ 0.44
PEPDP12955 AC093827.2-201ENST00000512654 315 ntBASIC17.79■□□□□ 0.44
PEPDP12955 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.79■□□□□ 0.44
PEPDP12955 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.79■□□□□ 0.44
PEPDP12955 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.79■□□□□ 0.44
PEPDP12955 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.79■□□□□ 0.44
PEPDP12955 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PEPDP12955 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PEPDP12955 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PEPDP12955 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEPDP12955 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PEPDP12955 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.79■□□□□ 0.44
PEPDP12955 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.78■□□□□ 0.44
PEPDP12955 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PEPDP12955 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms