Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.17■□□□□ 0.02
TRGV3P03979 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV3P03979 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV3P03979 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRGV3P03979 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV3P03979 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRGV3P03979 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV3P03979 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV3P03979 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 RARRES2P10-201ENST00000564312 460 ntBASIC15.16■□□□□ 0.02
TRGV3P03979 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.16■□□□□ 0.02
TRGV3P03979 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.16■□□□□ 0.02
TRGV3P03979 AP006294.2-201ENST00000641667 209 ntBASIC15.16■□□□□ 0.02
TRGV3P03979 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV3P03979 AL135905.2-201ENST00000584934 1404 ntBASIC15.16■□□□□ 0.02
TRGV3P03979 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV3P03979 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV3P03979 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRGV3P03979 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV3P03979 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRGV3P03979 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TRGV3P03979 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRGV3P03979 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRGV3P03979 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV3P03979 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV3P03979 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV3P03979 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
TRGV3P03979 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV3P03979 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.15■□□□□ 0.02
TRGV3P03979 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRGV3P03979 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRGV3P03979 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRGV3P03979 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV3P03979 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRGV3P03979 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.14■□□□□ 0.01
TRGV3P03979 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRGV3P03979 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRGV3P03979 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.14■□□□□ 0.01
TRGV3P03979 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRGV3P03979 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.14■□□□□ 0.01
TRGV3P03979 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.14■□□□□ 0.01
TRGV3P03979 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRGV3P03979 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV3P03979 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms