Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC005332.1-201ENST00000577698 1310 ntBASIC16.13■□□□□ 0.17
ABCA1O95477 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCA1O95477 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ABCA1O95477 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCA1O95477 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.13■□□□□ 0.17
ABCA1O95477 AC116562.4-202ENST00000641738 218 ntBASIC16.13■□□□□ 0.17
ABCA1O95477 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCA1O95477 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCA1O95477 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.13■□□□□ 0.17
ABCA1O95477 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCA1O95477 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCA1O95477 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCA1O95477 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ABCA1O95477 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.12■□□□□ 0.17
ABCA1O95477 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 AL023803.3-201ENST00000615559 522 ntBASIC16.12■□□□□ 0.17
ABCA1O95477 AC010653.2-201ENST00000623505 997 ntBASIC16.12■□□□□ 0.17
ABCA1O95477 AC131212.4-201ENST00000623606 975 ntBASIC16.12■□□□□ 0.17
ABCA1O95477 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.12■□□□□ 0.17
ABCA1O95477 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ABCA1O95477 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.12■□□□□ 0.17
ABCA1O95477 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 AC116351.2-201ENST00000606540 1585 ntBASIC16.12■□□□□ 0.17
ABCA1O95477 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ABCA1O95477 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ABCA1O95477 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCA1O95477 FEM1AP1-201ENST00000431297 1995 ntBASIC16.11■□□□□ 0.17
ABCA1O95477 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.11■□□□□ 0.17
ABCA1O95477 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ABCA1O95477 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
ABCA1O95477 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.11■□□□□ 0.17
ABCA1O95477 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.11■□□□□ 0.17
ABCA1O95477 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.11■□□□□ 0.17
ABCA1O95477 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.11■□□□□ 0.17
ABCA1O95477 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.11■□□□□ 0.17
ABCA1O95477 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.11■□□□□ 0.17
ABCA1O95477 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.11■□□□□ 0.17
ABCA1O95477 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.11■□□□□ 0.17
ABCA1O95477 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.11■□□□□ 0.17
ABCA1O95477 SMG8-203ENST00000578922 2178 ntBASIC16.11■□□□□ 0.17
ABCA1O95477 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.11■□□□□ 0.17
ABCA1O95477 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 PCED1CP-201ENST00000419887 785 ntBASIC16.11■□□□□ 0.17
ABCA1O95477 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.11■□□□□ 0.17
ABCA1O95477 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.11■□□□□ 0.17
ABCA1O95477 AC008040.2-201ENST00000461049 708 ntBASIC16.11■□□□□ 0.17
ABCA1O95477 Z85996.1-201ENST00000494644 937 ntBASIC16.11■□□□□ 0.17
ABCA1O95477 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.11■□□□□ 0.17
ABCA1O95477 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.11■□□□□ 0.17
ABCA1O95477 CLEC4GP1-201ENST00000596555 870 ntBASIC16.11■□□□□ 0.17
ABCA1O95477 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ABCA1O95477 AC069148.1-201ENST00000608741 768 ntBASIC16.11■□□□□ 0.17
ABCA1O95477 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ABCA1O95477 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.11■□□□□ 0.17
ABCA1O95477 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ABCA1O95477 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ABCA1O95477 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ABCA1O95477 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ABCA1O95477 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ABCA1O95477 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ABCA1O95477 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ABCA1O95477 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ABCA1O95477 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ABCA1O95477 FAM86EP-206ENST00000510506 987 ntBASIC16.1■□□□□ 0.17
ABCA1O95477 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.1■□□□□ 0.17
ABCA1O95477 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.1■□□□□ 0.17
ABCA1O95477 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.1■□□□□ 0.17
ABCA1O95477 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms