Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PHF1O43189 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.63■□□□□ 0.25
PHF1O43189 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.63■□□□□ 0.25
PHF1O43189 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.63■□□□□ 0.25
PHF1O43189 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.63■□□□□ 0.25
PHF1O43189 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.63■□□□□ 0.25
PHF1O43189 AC023632.3-201ENST00000521633 145 ntBASIC16.63■□□□□ 0.25
PHF1O43189 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.63■□□□□ 0.25
PHF1O43189 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PHF1O43189 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 AL691432.2-201ENST00000607222 2038 ntBASIC16.63■□□□□ 0.25
PHF1O43189 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PHF1O43189 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PHF1O43189 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHF1O43189 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
PHF1O43189 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.62■□□□□ 0.25
PHF1O43189 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.62■□□□□ 0.25
PHF1O43189 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.62■□□□□ 0.25
PHF1O43189 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PHF1O43189 TNXA-203ENST00000507684 2038 ntBASIC16.62■□□□□ 0.25
PHF1O43189 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PHF1O43189 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.62■□□□□ 0.25
PHF1O43189 AC239809.2-201ENST00000415381 517 ntBASIC16.62■□□□□ 0.25
PHF1O43189 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.62■□□□□ 0.25
PHF1O43189 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PHF1O43189 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.62■□□□□ 0.25
PHF1O43189 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PHF1O43189 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.62■□□□□ 0.25
PHF1O43189 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 AC124016.1-201ENST00000609552 612 ntBASIC16.62■□□□□ 0.25
PHF1O43189 AC113410.3-201ENST00000623366 203 ntBASIC16.62■□□□□ 0.25
PHF1O43189 AL023875.1-201ENST00000640777 796 ntBASIC16.62■□□□□ 0.25
PHF1O43189 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.62■□□□□ 0.25
PHF1O43189 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.62■□□□□ 0.25
PHF1O43189 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 AC005332.7-201ENST00000614046 2005 ntBASIC16.62■□□□□ 0.25
PHF1O43189 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.62■□□□□ 0.25
PHF1O43189 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHF1O43189 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.61■□□□□ 0.25
PHF1O43189 AC124283.5-201ENST00000624661 1809 ntBASIC16.61■□□□□ 0.25
PHF1O43189 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.61■□□□□ 0.25
PHF1O43189 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
PHF1O43189 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.61■□□□□ 0.25
PHF1O43189 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.61■□□□□ 0.25
PHF1O43189 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.61■□□□□ 0.25
PHF1O43189 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PHF1O43189 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms