Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
AP3B1O00203 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.47■□□□□ 0.71
AP3B1O00203 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3B1O00203 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.47■□□□□ 0.71
AP3B1O00203 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
AP3B1O00203 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
AP3B1O00203 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3B1O00203 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
AP3B1O00203 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.46■□□□□ 0.71
AP3B1O00203 FP475955.4-201ENST00000623131 1990 ntBASIC19.46■□□□□ 0.71
AP3B1O00203 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3B1O00203 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.46■□□□□ 0.71
AP3B1O00203 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AP3B1O00203 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
AP3B1O00203 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AP3B1O00203 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.46■□□□□ 0.71
AP3B1O00203 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 AC026366.1-201ENST00000488803 879 ntBASIC19.46■□□□□ 0.71
AP3B1O00203 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
AP3B1O00203 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.46■□□□□ 0.71
AP3B1O00203 AC008403.3-201ENST00000598924 454 ntBASIC19.46■□□□□ 0.71
AP3B1O00203 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
AP3B1O00203 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.46■□□□□ 0.71
AP3B1O00203 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AP3B1O00203 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3B1O00203 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP3B1O00203 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.45■□□□□ 0.7
AP3B1O00203 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.45■□□□□ 0.7
AP3B1O00203 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
AP3B1O00203 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.45■□□□□ 0.7
AP3B1O00203 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.45■□□□□ 0.7
AP3B1O00203 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.45■□□□□ 0.7
AP3B1O00203 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.45■□□□□ 0.7
AP3B1O00203 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
AP3B1O00203 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
AP3B1O00203 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.45■□□□□ 0.7
AP3B1O00203 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
AP3B1O00203 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.45■□□□□ 0.7
AP3B1O00203 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3B1O00203 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.44■□□□□ 0.7
AP3B1O00203 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
AP3B1O00203 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
AP3B1O00203 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.44■□□□□ 0.7
AP3B1O00203 TSPY21P-201ENST00000433481 731 ntBASIC19.44■□□□□ 0.7
AP3B1O00203 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.44■□□□□ 0.7
AP3B1O00203 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.44■□□□□ 0.7
AP3B1O00203 C1QL1P1-201ENST00000568105 661 ntBASIC19.44■□□□□ 0.7
AP3B1O00203 AC138932.1-201ENST00000534164 6830 ntBASIC19.44■□□□□ 0.7
AP3B1O00203 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP3B1O00203 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
AP3B1O00203 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AP3B1O00203 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AP3B1O00203 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AP3B1O00203 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3B1O00203 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP3B1O00203 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
AP3B1O00203 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP3B1O00203 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP3B1O00203 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms