Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AC099398.1-201ENST00000567919 2776 ntBASIC13.61□□□□□ -0.23
LINC01546A6NGU7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AC012317.2-201ENST00000623305 2251 ntBASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 AC135279.3-201ENST00000610945 1311 ntBASIC13.61□□□□□ -0.23
LINC01546A6NGU7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01546A6NGU7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.6□□□□□ -0.23
LINC01546A6NGU7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 AL136162.1-201ENST00000607711 1078 ntBASIC13.6□□□□□ -0.23
LINC01546A6NGU7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 AC124067.4-201ENST00000519691 2379 ntBASIC13.6□□□□□ -0.23
LINC01546A6NGU7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms