Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC160A6NGH7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC160A6NGH7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC160A6NGH7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC160A6NGH7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC160A6NGH7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC160A6NGH7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC160A6NGH7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC160A6NGH7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC160A6NGH7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC160A6NGH7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC160A6NGH7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC160A6NGH7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 AL031598.1-201ENST00000561511 1773 ntBASIC17.89■□□□□ 0.45
CCDC160A6NGH7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 RNF126P1-201ENST00000567452 1320 ntBASIC17.89■□□□□ 0.45
CCDC160A6NGH7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC160A6NGH7 Z98044.1-201ENST00000632503 1764 ntBASIC17.89■□□□□ 0.45
CCDC160A6NGH7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC160A6NGH7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 AC009237.14-201ENST00000609975 1594 ntBASIC17.87■□□□□ 0.45
CCDC160A6NGH7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC160A6NGH7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms