Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 KRT8P20-201ENST00000423953 1409 ntBASIC15.68■□□□□ 0.1
RNF222A6NCQ9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF222A6NCQ9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 AC233992.3-201ENST00000607491 485 ntBASIC15.67■□□□□ 0.1
RNF222A6NCQ9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF222A6NCQ9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 KRT87P-202ENST00000534226 1464 ntBASIC15.66■□□□□ 0.1
RNF222A6NCQ9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 AC243732.1-201ENST00000612648 864 ntBASIC15.66■□□□□ 0.1
RNF222A6NCQ9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 AL358852.1-201ENST00000623174 1268 ntBASIC15.66■□□□□ 0.1
RNF222A6NCQ9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 AC080080.1-201ENST00000625121 2420 ntBASIC15.66■□□□□ 0.1
RNF222A6NCQ9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF222A6NCQ9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 AC010141.2-201ENST00000452426 721 ntBASIC15.65■□□□□ 0.1
RNF222A6NCQ9 AC009299.2-201ENST00000482477 511 ntBASIC15.65■□□□□ 0.1
RNF222A6NCQ9 SLC7A5P2-201ENST00000553010 536 ntBASIC15.65■□□□□ 0.1
RNF222A6NCQ9 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.65■□□□□ 0.1
RNF222A6NCQ9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF222A6NCQ9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms