Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 KRT16P3-201ENST00000439127 1283 ntBASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 UNC93B8-201ENST00000511903 705 ntBASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 AC105233.4-201ENST00000642045 216 ntBASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
TRAV13-2A0A0B4J235 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 BX842568.3-201ENST00000418104 571 ntBASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 AICDA-202ENST00000537228 667 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 ABALON-201ENST00000629058 1903 ntBASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
TRAV13-2A0A0B4J235 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 IGHV3-19-201ENST00000521488 291 ntBASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV13-2A0A0B4J235 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV13-2A0A0B4J235 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms