Protein–RNA interactions for Protein: Q9Y2D1

ATF5, Cyclic AMP-dependent transcription factor ATF-5, humanhuman

Predicted RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF5Q9Y2D1 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ATF5Q9Y2D1 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
ATF5Q9Y2D1 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
ATF5Q9Y2D1 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
ATF5Q9Y2D1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC8.78□□□□□ -1
ATF5Q9Y2D1 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ATF5Q9Y2D1 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.78□□□□□ -1
ATF5Q9Y2D1 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
ATF5Q9Y2D1 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.78□□□□□ -1
ATF5Q9Y2D1 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ATF5Q9Y2D1 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
ATF5Q9Y2D1 AC000374.1-201ENST00000434698 1745 ntBASIC8.77□□□□□ -1
ATF5Q9Y2D1 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
ATF5Q9Y2D1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 RNU6-288P-201ENST00000363690 104 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 Y_RNA.571-201ENST00000384753 98 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 SNORA17A-201ENST00000391185 133 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AL590143.1-201ENST00000405071 138 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AL357139.1-201ENST00000407792 426 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AL590399.2-201ENST00000427536 309 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 RPL21P40-201ENST00000428586 483 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 GAPDHP20-201ENST00000444107 1007 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 HMGN1P11-201ENST00000508668 303 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 IGLVIV-53-201ENST00000520107 367 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 IGLVV-66-201ENST00000523818 341 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC090022.1-201ENST00000546569 311 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC111186.1-201ENST00000604684 130 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 SNORA17.5-201ENST00000630429 132 ntBASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
ATF5Q9Y2D1 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC100778.3-201ENST00000580060 1750 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AP000766.1-201ENST00000561746 4140 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC008758.3-201ENST00000507003 1829 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 NLRP9P1-201ENST00000540920 2655 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RNU6-151P-201ENST00000364158 107 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC116036.1-201ENST00000412199 367 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RPL23AP26-201ENST00000412728 464 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RPL31P2-201ENST00000413849 377 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 HMGB1P27-201ENST00000431429 603 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RPL5P7-201ENST00000444235 813 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 SNORA31.3-201ENST00000516029 96 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 Y_RNA.686-201ENST00000516548 134 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RNU6-971P-201ENST00000516920 106 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RN7SKP258-201ENST00000517151 304 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RN7SL178P-201ENST00000582930 304 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC099506.2-201ENST00000623074 221 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 CLCA3P-203ENST00000490028 2781 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC090132.1-201ENST00000524071 1480 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC016745.2-201ENST00000608834 3443 ntBASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATF5Q9Y2D1 AC123769.1-201ENST00000530992 3192 ntBASIC8.75□□□□□ -1.01
ATF5Q9Y2D1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
ATF5Q9Y2D1 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms