RNA–Protein interactions for RNA: ENST00000216468.7

TMED8-201, Transcript of transmembrane p24 trafficking protein family member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED8, Length 7,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED8-201ENST00000216468 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
TMED8-201ENST00000216468 SUPT5HO00267 1087 aaKnown RBP13.63□□□□□ -0.23
TMED8-201ENST00000216468 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
TMED8-201ENST00000216468 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
TMED8-201ENST00000216468 TTBK1Q5TCY1 1321 aaPredicted RBP13.07□□□□□ -0.32
TMED8-201ENST00000216468 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
TMED8-201ENST00000216468 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
TMED8-201ENST00000216468 RANGAP1P46060 587 aaPredicted RBP12.8□□□□□ -0.36
TMED8-201ENST00000216468 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
TMED8-201ENST00000216468 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
TMED8-201ENST00000216468 APLP2Q06481 763 aa12.7□□□□□ -0.38
TMED8-201ENST00000216468 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
TMED8-201ENST00000216468 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
TMED8-201ENST00000216468 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
TMED8-201ENST00000216468 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
TMED8-201ENST00000216468 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
TMED8-201ENST00000216468 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
TMED8-201ENST00000216468 TRIM41Q8WV44 630 aa12.4□□□□□ -0.43
TMED8-201ENST00000216468 UBTFP17480 764 aaKnown RBP12.34□□□□□ -0.43
TMED8-201ENST00000216468 HRCP23327 699 aa12.26□□□□□ -0.45
TMED8-201ENST00000216468 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
TMED8-201ENST00000216468 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
TMED8-201ENST00000216468 ITGAEP38570 1179 aa12.19□□□□□ -0.46
TMED8-201ENST00000216468 MYT1Q01538 1121 aa12.19□□□□□ -0.46
TMED8-201ENST00000216468 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
TMED8-201ENST00000216468 NEFLP07196 543 aa12.16□□□□□ -0.46
TMED8-201ENST00000216468 POLR3GLQ9BT43 218 aa12.13□□□□□ -0.47
TMED8-201ENST00000216468 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
TMED8-201ENST00000216468 TRIM26Q12899 539 aaPredicted RBP12.02□□□□□ -0.49
TMED8-201ENST00000216468 CHIC1Q5VXU3 224 aa11.99□□□□□ -0.49
TMED8-201ENST00000216468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.96□□□□□ -0.5
TMED8-201ENST00000216468 MYT1LQ9UL68 1186 aa11.92□□□□□ -0.5
TMED8-201ENST00000216468 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
TMED8-201ENST00000216468 BCANQ96GW7 911 aa11.82□□□□□ -0.52
TMED8-201ENST00000216468 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
TMED8-201ENST00000216468 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
TMED8-201ENST00000216468 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
TMED8-201ENST00000216468 NEUROD1Q13562 356 aa11.72□□□□□ -0.53
TMED8-201ENST00000216468 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
TMED8-201ENST00000216468 CLSPNQ9HAW4 1339 aa11.69□□□□□ -0.54
TMED8-201ENST00000216468 FAM50AQ14320 339 aaKnown RBP11.67□□□□□ -0.54
TMED8-201ENST00000216468 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
TMED8-201ENST00000216468 ZNF326Q5BKZ1 582 aaKnown RBP11.61□□□□□ -0.55
TMED8-201ENST00000216468 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
TMED8-201ENST00000216468 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
TMED8-201ENST00000216468 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
TMED8-201ENST00000216468 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
TMED8-201ENST00000216468 ARID3CA6NKF2 412 aa11.52□□□□□ -0.56
TMED8-201ENST00000216468 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
TMED8-201ENST00000216468 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
TMED8-201ENST00000216468 P3H3Q8IVL6 736 aa11.46□□□□□ -0.58
TMED8-201ENST00000216468 ANP32CO43423 234 aa11.42□□□□□ -0.58
TMED8-201ENST00000216468 FBLN2P98095 1184 aa11.41□□□□□ -0.58
TMED8-201ENST00000216468 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
TMED8-201ENST00000216468 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
TMED8-201ENST00000216468 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
TMED8-201ENST00000216468 MYO15BQ96JP2 1530 aa11.32□□□□□ -0.6
TMED8-201ENST00000216468 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
TMED8-201ENST00000216468 FKBP8Q14318 412 aa11.3□□□□□ -0.6
TMED8-201ENST00000216468 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
TMED8-201ENST00000216468 ZNF777Q9ULD5 760 aaPredicted RBP11.28□□□□□ -0.6
TMED8-201ENST00000216468 SENP3-EIF4A1A0A087X0R7 540 aa11.27□□□□□ -0.61
TMED8-201ENST00000216468 ABCC9O60706 1549 aa11.26□□□□□ -0.61
TMED8-201ENST00000216468 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
TMED8-201ENST00000216468 HIRIP3Q9BW71 556 aaPredicted RBP11.26□□□□□ -0.61
TMED8-201ENST00000216468 ARXQ96QS3 562 aa11.26□□□□□ -0.61
TMED8-201ENST00000216468 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
TMED8-201ENST00000216468 PLPPR3Q6T4P5 718 aa11.25□□□□□ -0.61
TMED8-201ENST00000216468 FAM9BQ8IZU0 186 aa11.24□□□□□ -0.61
TMED8-201ENST00000216468 IRX6P78412 446 aaPredicted RBP11.23□□□□□ -0.61
TMED8-201ENST00000216468 NBR1Q14596 966 aa11.23□□□□□ -0.61
TMED8-201ENST00000216468 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
TMED8-201ENST00000216468 HNRNPUQ00839 825 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMED8-201ENST00000216468 ANP32AP39687 249 aaKnown RBP11.2□□□□□ -0.62
TMED8-201ENST00000216468 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.63
TMED8-201ENST00000216468 CHIC2Q9UKJ5 165 aa11.14□□□□□ -0.63
TMED8-201ENST00000216468 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
TMED8-201ENST00000216468 MIER1Q8N108 512 aa11.13□□□□□ -0.63
TMED8-201ENST00000216468 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
TMED8-201ENST00000216468 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
TMED8-201ENST00000216468 NEFMP07197 916 aa11.1□□□□□ -0.63
TMED8-201ENST00000216468 DCAF1Q9Y4B6 1507 aa11.08□□□□□ -0.64
TMED8-201ENST00000216468 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
TMED8-201ENST00000216468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
TMED8-201ENST00000216468 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
TMED8-201ENST00000216468 TONSLQ96HA7 1378 aa11.04□□□□□ -0.64
TMED8-201ENST00000216468 TMC1Q8TDI8 760 aa11.03□□□□□ -0.64
TMED8-201ENST00000216468 ANP32EQ9BTT0 268 aa11□□□□□ -0.65
TMED8-201ENST00000216468 MRS2Q9HD23 443 aa10.99□□□□□ -0.65
TMED8-201ENST00000216468 STAG3Q9UJ98 1225 aa10.99□□□□□ -0.65
TMED8-201ENST00000216468 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
TMED8-201ENST00000216468 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
TMED8-201ENST00000216468 CCDC180Q9P1Z9 1646 aa10.95□□□□□ -0.66
TMED8-201ENST00000216468 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
TMED8-201ENST00000216468 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
TMED8-201ENST00000216468 A0A0G2JS52 829 aa10.92□□□□□ -0.66
TMED8-201ENST00000216468 RRP7BPQ9NSQ0 103 aa10.92□□□□□ -0.66
TMED8-201ENST00000216468 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
TMED8-201ENST00000216468 RGL3Q3MIN7 710 aa10.89□□□□□ -0.67
TMED8-201ENST00000216468 WDR43Q15061 677 aaKnown RBP eCLIP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms