RNA–Protein interactions for RNA: ENST00000392440.3

CCDC62-203, Transcript of coiled-coil domain containing 62, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC62, Length 2,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62-203ENST00000392440 NISCHQ9Y2I1 1504 aa16.02■□□□□ 0.16
CCDC62-203ENST00000392440 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
CCDC62-203ENST00000392440 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
CCDC62-203ENST00000392440 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
CCDC62-203ENST00000392440 HRCP23327 699 aa13.69□□□□□ -0.22
CCDC62-203ENST00000392440 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
CCDC62-203ENST00000392440 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
CCDC62-203ENST00000392440 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.23
CCDC62-203ENST00000392440 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.24
CCDC62-203ENST00000392440 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
CCDC62-203ENST00000392440 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
CCDC62-203ENST00000392440 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
CCDC62-203ENST00000392440 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
CCDC62-203ENST00000392440 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
CCDC62-203ENST00000392440 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
CCDC62-203ENST00000392440 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
CCDC62-203ENST00000392440 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
CCDC62-203ENST00000392440 ABCC9O60706 1549 aa12.94□□□□□ -0.34
CCDC62-203ENST00000392440 SENP3Q9H4L4 574 aaPredicted RBP12.93□□□□□ -0.34
CCDC62-203ENST00000392440 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
CCDC62-203ENST00000392440 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
CCDC62-203ENST00000392440 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
CCDC62-203ENST00000392440 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
CCDC62-203ENST00000392440 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
CCDC62-203ENST00000392440 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
CCDC62-203ENST00000392440 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
CCDC62-203ENST00000392440 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
CCDC62-203ENST00000392440 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
CCDC62-203ENST00000392440 NEUROD1Q13562 356 aa12.51□□□□□ -0.41
CCDC62-203ENST00000392440 MYT1Q01538 1121 aa12.48□□□□□ -0.41
CCDC62-203ENST00000392440 EIF4G1Q04637 1599 aaKnown RBP12.48□□□□□ -0.41
CCDC62-203ENST00000392440 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
CCDC62-203ENST00000392440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
CCDC62-203ENST00000392440 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
CCDC62-203ENST00000392440 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
CCDC62-203ENST00000392440 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
CCDC62-203ENST00000392440 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
CCDC62-203ENST00000392440 WIZO95785 1651 aa12.42□□□□□ -0.42
CCDC62-203ENST00000392440 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
CCDC62-203ENST00000392440 BAZ1AQ9NRL2 1556 aaPredicted RBP12.4□□□□□ -0.42
CCDC62-203ENST00000392440 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
CCDC62-203ENST00000392440 NACADO15069 1562 aa12.39□□□□□ -0.43
CCDC62-203ENST00000392440 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
CCDC62-203ENST00000392440 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
CCDC62-203ENST00000392440 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
CCDC62-203ENST00000392440 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
CCDC62-203ENST00000392440 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
CCDC62-203ENST00000392440 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
CCDC62-203ENST00000392440 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
CCDC62-203ENST00000392440 EEA1Q15075 1411 aa12.22□□□□□ -0.45
CCDC62-203ENST00000392440 SMARCA2P51531 1590 aa12.19□□□□□ -0.46
CCDC62-203ENST00000392440 SOGA1O94964 1423 aa12.17□□□□□ -0.46
CCDC62-203ENST00000392440 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
CCDC62-203ENST00000392440 GOLGA3Q08378 1498 aa12.13□□□□□ -0.47
CCDC62-203ENST00000392440 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
CCDC62-203ENST00000392440 MIER1Q8N108 512 aa12.11□□□□□ -0.47
CCDC62-203ENST00000392440 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
CCDC62-203ENST00000392440 FOXD1Q16676 465 aa12.1□□□□□ -0.47
CCDC62-203ENST00000392440 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
CCDC62-203ENST00000392440 KIF21BO75037 1637 aa12.07□□□□□ -0.48
CCDC62-203ENST00000392440 YTHDC1Q96MU7 727 aaKnown RBP12.06□□□□□ -0.48
CCDC62-203ENST00000392440 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
CCDC62-203ENST00000392440 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.48
CCDC62-203ENST00000392440 CLSPNQ9HAW4 1339 aa12.02□□□□□ -0.49
CCDC62-203ENST00000392440 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
CCDC62-203ENST00000392440 VPS8Q8N3P4 1428 aa11.99□□□□□ -0.49
CCDC62-203ENST00000392440 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
CCDC62-203ENST00000392440 CLIP1P30622 1438 aa11.97□□□□□ -0.49
CCDC62-203ENST00000392440 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.49
CCDC62-203ENST00000392440 SYNJ1O43426 1573 aa11.95□□□□□ -0.5
CCDC62-203ENST00000392440 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
CCDC62-203ENST00000392440 SUPT16HQ9Y5B9 1047 aaKnown RBP11.9□□□□□ -0.5
CCDC62-203ENST00000392440 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.51
CCDC62-203ENST00000392440 RAPGEF2Q9Y4G8 1499 aa11.86□□□□□ -0.51
CCDC62-203ENST00000392440 APLP2Q06481 763 aa11.84□□□□□ -0.51
CCDC62-203ENST00000392440 CUX2O14529 1486 aa11.83□□□□□ -0.52
CCDC62-203ENST00000392440 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
CCDC62-203ENST00000392440 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
CCDC62-203ENST00000392440 RRBP1Q9P2E9 1410 aaKnown RBP11.8□□□□□ -0.52
CCDC62-203ENST00000392440 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
CCDC62-203ENST00000392440 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
CCDC62-203ENST00000392440 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
CCDC62-203ENST00000392440 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
CCDC62-203ENST00000392440 BIVM-ERCC5R4GMW8 1640 aa11.77□□□□□ -0.53
CCDC62-203ENST00000392440 ANP32EQ9BTT0 268 aa11.76□□□□□ -0.53
CCDC62-203ENST00000392440 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
CCDC62-203ENST00000392440 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
CCDC62-203ENST00000392440 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
CCDC62-203ENST00000392440 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
CCDC62-203ENST00000392440 MAPKBP1O60336 1514 aa11.67□□□□□ -0.54
CCDC62-203ENST00000392440 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
CCDC62-203ENST00000392440 RANGAP1P46060 587 aaPredicted RBP11.62□□□□□ -0.55
CCDC62-203ENST00000392440 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
CCDC62-203ENST00000392440 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
CCDC62-203ENST00000392440 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
CCDC62-203ENST00000392440 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC62-203ENST00000392440 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
CCDC62-203ENST00000392440 CUX1P39880 1505 aa11.57□□□□□ -0.56
CCDC62-203ENST00000392440 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
CCDC62-203ENST00000392440 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms