RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
HMGN1P11-201ENST00000508668 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
HMGN1P11-201ENST00000508668 PHF23Q9BUL5 403 aaPredicted RBP12.4□□□□□ -0.42
HMGN1P11-201ENST00000508668 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
HMGN1P11-201ENST00000508668 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
HMGN1P11-201ENST00000508668 FOXD1Q16676 465 aa11.47□□□□□ -0.57
HMGN1P11-201ENST00000508668 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
HMGN1P11-201ENST00000508668 MSH5O43196 834 aa11.04□□□□□ -0.64
HMGN1P11-201ENST00000508668 ADRA2BP18089 450 aa10.93□□□□□ -0.66
HMGN1P11-201ENST00000508668 PPP6R1Q9UPN7 881 aa10.92□□□□□ -0.66
HMGN1P11-201ENST00000508668 PIAS4Q8N2W9 510 aaPredicted RBP10.75□□□□□ -0.69
HMGN1P11-201ENST00000508668 PPP4R3CPQ6ZMV5 832 aa10.14□□□□□ -0.79
HMGN1P11-201ENST00000508668 KCNA4P22459 653 aa10.01□□□□□ -0.81
HMGN1P11-201ENST00000508668 SCAF1Q9H7N4 1312 aaKnown RBP9.98□□□□□ -0.81
HMGN1P11-201ENST00000508668 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P11-201ENST00000508668 NCBP3Q53F19 620 aaKnown RBP9.89□□□□□ -0.83
HMGN1P11-201ENST00000508668 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
HMGN1P11-201ENST00000508668 CACNB1Q02641 598 aaPredicted RBP9.76□□□□□ -0.85
HMGN1P11-201ENST00000508668 NPM3O75607 178 aaKnown RBP9.75□□□□□ -0.85
HMGN1P11-201ENST00000508668 DMRT2Q9Y5R5 561 aa9.71□□□□□ -0.86
HMGN1P11-201ENST00000508668 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
HMGN1P11-201ENST00000508668 SLC4A1APQ9BWU0 796 aaKnown RBP9.55□□□□□ -0.88
HMGN1P11-201ENST00000508668 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
HMGN1P11-201ENST00000508668 DCAF8L1A6NGE4 600 aa9.51□□□□□ -0.89
HMGN1P11-201ENST00000508668 EHMT2Q96KQ7 1210 aa9.41□□□□□ -0.9
HMGN1P11-201ENST00000508668 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
HMGN1P11-201ENST00000508668 RNF39Q9H2S5 420 aa9.27□□□□□ -0.93
HMGN1P11-201ENST00000508668 CSRNP3Q8WYN3 585 aa9.21□□□□□ -0.94
HMGN1P11-201ENST00000508668 ZBTB22O15209 634 aa9.2□□□□□ -0.94
HMGN1P11-201ENST00000508668 C1QBPQ07021 282 aaKnown RBP9.19□□□□□ -0.94
HMGN1P11-201ENST00000508668 SLC4A2P04920 1241 aa9.18□□□□□ -0.94
HMGN1P11-201ENST00000508668 FOXD4L1Q9NU39 408 aa9.17□□□□□ -0.94
HMGN1P11-201ENST00000508668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGN1P11-201ENST00000508668 MYCNP04198 464 aaPredicted RBP9□□□□□ -0.97
HMGN1P11-201ENST00000508668 U3KPZ7 1027 aaPredicted RBP8.97□□□□□ -0.97
HMGN1P11-201ENST00000508668 NISCHQ9Y2I1 1504 aa8.9□□□□□ -0.98
HMGN1P11-201ENST00000508668 POTEHQ6S545 545 aa8.88□□□□□ -0.99
HMGN1P11-201ENST00000508668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.87□□□□□ -0.99
HMGN1P11-201ENST00000508668 HNRNPUL2Q1KMD3 747 aaKnown RBP8.87□□□□□ -0.99
HMGN1P11-201ENST00000508668 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
HMGN1P11-201ENST00000508668 ATXN8OSP0DMR3 200 aa8.8□□□□□ -1
HMGN1P11-201ENST00000508668 APLP2Q06481 763 aa8.77□□□□□ -1.01
HMGN1P11-201ENST00000508668 ATF5Q9Y2D1 282 aaPredicted RBP8.77□□□□□ -1.01
HMGN1P11-201ENST00000508668 SPINK5Q9NQ38 1064 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P11-201ENST00000508668 CAPN15O75808 1086 aa8.7□□□□□ -1.02
HMGN1P11-201ENST00000508668 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
HMGN1P11-201ENST00000508668 ZNF219Q9P2Y4 722 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P11-201ENST00000508668 ABCB7O75027 752 aa8.55□□□□□ -1.04
HMGN1P11-201ENST00000508668 DSG3P32926 999 aa8.55□□□□□ -1.04
HMGN1P11-201ENST00000508668 POLA2Q14181 598 aa8.54□□□□□ -1.04
HMGN1P11-201ENST00000508668 FBLN2P98095 1184 aa8.4□□□□□ -1.06
HMGN1P11-201ENST00000508668 MKRN4PQ13434 485 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P11-201ENST00000508668 ZBTB12Q9Y330 459 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P11-201ENST00000508668 FKBP8Q14318 412 aa8.35□□□□□ -1.07
HMGN1P11-201ENST00000508668 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
HMGN1P11-201ENST00000508668 SPDYE4A6NLX3 237 aa8.25□□□□□ -1.09
HMGN1P11-201ENST00000508668 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
HMGN1P11-201ENST00000508668 CHRDL2Q6WN34 429 aa8.23□□□□□ -1.09
HMGN1P11-201ENST00000508668 ZNF692Q9BU19 519 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P11-201ENST00000508668 SPDYE2BA6NHP3 402 aa8.15□□□□□ -1.1
HMGN1P11-201ENST00000508668 SPDYE6P0CI01 402 aa8.15□□□□□ -1.1
HMGN1P11-201ENST00000508668 SPDYE2Q495Y8 402 aa8.15□□□□□ -1.1
HMGN1P11-201ENST00000508668 SP7Q8TDD2 431 aaPredicted RBP8.13□□□□□ -1.11
HMGN1P11-201ENST00000508668 SSUH2Q9Y2M2 353 aa8.09□□□□□ -1.11
HMGN1P11-201ENST00000508668 PROM2Q8N271 834 aa8.07□□□□□ -1.12
HMGN1P11-201ENST00000508668 PABPN1Q86U42 306 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGN1P11-201ENST00000508668 ABCC9O60706 1549 aa8.06□□□□□ -1.12
HMGN1P11-201ENST00000508668 AKT1S1Q96B36 256 aa8□□□□□ -1.13
HMGN1P11-201ENST00000508668 FBXO3Q9UK99 471 aa8□□□□□ -1.13
HMGN1P11-201ENST00000508668 CCDC180Q9P1Z9 1646 aa8□□□□□ -1.13
HMGN1P11-201ENST00000508668 HAX1O00165 279 aa7.99□□□□□ -1.13
HMGN1P11-201ENST00000508668 REM2Q8IYK8 340 aaPredicted RBP7.93□□□□□ -1.14
HMGN1P11-201ENST00000508668 STAG3Q9UJ98 1225 aa7.92□□□□□ -1.14
HMGN1P11-201ENST00000508668 CLEC11AQ9Y240 323 aa7.91□□□□□ -1.14
HMGN1P11-201ENST00000508668 VASPP50552 380 aaPredicted RBP7.9□□□□□ -1.14
HMGN1P11-201ENST00000508668 PIP4P2Q8N4L2 257 aa7.9□□□□□ -1.14
HMGN1P11-201ENST00000508668 SPDYE1Q8NFV5 336 aaPredicted RBP7.9□□□□□ -1.14
HMGN1P11-201ENST00000508668 PITPNM1O00562 1244 aa7.86□□□□□ -1.15
HMGN1P11-201ENST00000508668 MIER1Q8N108 512 aa7.83□□□□□ -1.16
HMGN1P11-201ENST00000508668 PLCD3Q8N3E9 789 aa7.83□□□□□ -1.16
HMGN1P11-201ENST00000508668 PRR29P0C7W0 189 aa7.82□□□□□ -1.16
HMGN1P11-201ENST00000508668 IFNLR1Q8IU57 520 aaPredicted RBP7.8□□□□□ -1.16
HMGN1P11-201ENST00000508668 PLEKHG5O94827 1062 aa7.78□□□□□ -1.16
HMGN1P11-201ENST00000508668 KLHL34Q8N239 644 aa7.78□□□□□ -1.16
HMGN1P11-201ENST00000508668 DCAF8L2P0C7V8 631 aa7.77□□□□□ -1.17
HMGN1P11-201ENST00000508668 FXR2P51116 673 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGN1P11-201ENST00000508668 AMER1Q5JTC6 1135 aaPredicted RBP7.73□□□□□ -1.17
HMGN1P11-201ENST00000508668 RTN4Q9NQC3 1192 aaKnown RBP7.73□□□□□ -1.17
HMGN1P11-201ENST00000508668 CREBZFQ9NS37 354 aa7.73□□□□□ -1.17
HMGN1P11-201ENST00000508668 ZBTB47Q9UFB7 747 aaPredicted RBP7.71□□□□□ -1.18
HMGN1P11-201ENST00000508668 CHADLQ6NUI6 762 aa7.7□□□□□ -1.18
HMGN1P11-201ENST00000508668 RB1CC1Q8TDY2 1594 aa7.69□□□□□ -1.18
HMGN1P11-201ENST00000508668 SPOCK2Q92563 424 aa7.69□□□□□ -1.18
HMGN1P11-201ENST00000508668 PRKAR2AP13861 404 aaKnown RBP7.67□□□□□ -1.18
HMGN1P11-201ENST00000508668 MNX1P50219 401 aaPredicted RBP7.64□□□□□ -1.19
HMGN1P11-201ENST00000508668 LHX8Q68G74 356 aa7.64□□□□□ -1.19
HMGN1P11-201ENST00000508668 EVX2Q03828 476 aa7.63□□□□□ -1.19
HMGN1P11-201ENST00000508668 PLSCR2Q9NRY7 297 aa7.61□□□□□ -1.19
HMGN1P11-201ENST00000508668 FARP1Q9Y4F1 1045 aaPredicted RBP7.61□□□□□ -1.19
HMGN1P11-201ENST00000508668 NACADO15069 1562 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms