Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC008749.1-201ENST00000597650 306 ntBASIC7.39□□□□□ -1.23
NUBP1P53384 AL133393.1-201ENST00000603277 287 ntBASIC7.39□□□□□ -1.23
NUBP1P53384 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.39□□□□□ -1.23
NUBP1P53384 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.39□□□□□ -1.23
NUBP1P53384 AC022400.9-201ENST00000623633 273 ntBASIC7.39□□□□□ -1.23
NUBP1P53384 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUBP1P53384 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC7.39□□□□□ -1.23
NUBP1P53384 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUBP1P53384 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUBP1P53384 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUBP1P53384 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NUBP1P53384 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.39□□□□□ -1.23
NUBP1P53384 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC7.39□□□□□ -1.23
NUBP1P53384 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.39□□□□□ -1.23
NUBP1P53384 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
NUBP1P53384 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.39□□□□□ -1.23
NUBP1P53384 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC7.39□□□□□ -1.23
NUBP1P53384 AC090643.1-201ENST00000623600 3100 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC7.38□□□□□ -1.23
NUBP1P53384 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC7.38□□□□□ -1.23
NUBP1P53384 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
NUBP1P53384 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.38□□□□□ -1.23
NUBP1P53384 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
NUBP1P53384 Y_RNA.23-201ENST00000362496 106 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 RNU1-5P-201ENST00000362684 144 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 Y_RNA.123-201ENST00000363338 102 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 Y_RNA.136-201ENST00000363444 102 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 RNU4-84P-201ENST00000364200 139 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AC019155.1-201ENST00000382242 574 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 RNU6-843P-201ENST00000384454 104 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 RNA5SP155-201ENST00000411154 129 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC7.38□□□□□ -1.23
NUBP1P53384 AL117339.3-201ENST00000418733 162 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AHCYP8-201ENST00000425108 209 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.38□□□□□ -1.23
NUBP1P53384 AC128677.1-201ENST00000436016 442 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.38□□□□□ -1.23
NUBP1P53384 CYCSP44-201ENST00000448560 313 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AC090804.1-201ENST00000448870 490 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AL137159.1-201ENST00000452808 512 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.38□□□□□ -1.23
NUBP1P53384 RN7SL643P-201ENST00000471845 291 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AC097462.2-201ENST00000504623 481 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC7.38□□□□□ -1.23
NUBP1P53384 HIGD1AP3-201ENST00000515857 278 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 AC068213.1-201ENST00000625124 226 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 LRRC37A6P-202ENST00000448648 5444 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
NUBP1P53384 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.38□□□□□ -1.23
NUBP1P53384 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NUBP1P53384 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
NUBP1P53384 AC138409.1-201ENST00000505001 3598 ntBASIC7.38□□□□□ -1.23
NUBP1P53384 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUBP1P53384 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
NUBP1P53384 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
NUBP1P53384 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.37□□□□□ -1.23
NUBP1P53384 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.37□□□□□ -1.23
NUBP1P53384 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC7.37□□□□□ -1.23
NUBP1P53384 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.37□□□□□ -1.23
NUBP1P53384 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NUBP1P53384 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUBP1P53384 RNU6-1255P-201ENST00000363434 112 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 RNU6-879P-201ENST00000364328 108 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 SNORA70.8-201ENST00000384231 136 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 LAP3P1-201ENST00000403648 294 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 COX6A1P3-201ENST00000404167 293 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 RPSAP72-201ENST00000407020 358 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 RN7SKP139-201ENST00000410411 293 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.37□□□□□ -1.23
NUBP1P53384 RPS15AP7-201ENST00000439294 405 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC7.37□□□□□ -1.23
NUBP1P53384 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC7.37□□□□□ -1.23
NUBP1P53384 HIGD1AP2-201ENST00000446367 280 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 AC040975.1-201ENST00000472104 316 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 RN7SL88P-201ENST00000480166 299 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 AL591122.1-201ENST00000487348 492 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 IGKV2D-38-201ENST00000518423 240 ntBASIC7.37□□□□□ -1.23
NUBP1P53384 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms