RNA–Protein interactions for RNA: ENST00000358487.9

FGFR2-206, Transcript of fibroblast growth factor receptor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-206ENST00000358487 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
FGFR2-206ENST00000358487 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
FGFR2-206ENST00000358487 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
FGFR2-206ENST00000358487 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
FGFR2-206ENST00000358487 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
FGFR2-206ENST00000358487 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.15
FGFR2-206ENST00000358487 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
FGFR2-206ENST00000358487 PCGF6Q9BYE7 350 aa13.78□□□□□ -0.2
FGFR2-206ENST00000358487 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.2
FGFR2-206ENST00000358487 APLP2Q06481 763 aa13.73□□□□□ -0.21
FGFR2-206ENST00000358487 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
FGFR2-206ENST00000358487 ABCC9O60706 1549 aa13.65□□□□□ -0.22
FGFR2-206ENST00000358487 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
FGFR2-206ENST00000358487 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
FGFR2-206ENST00000358487 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
FGFR2-206ENST00000358487 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
FGFR2-206ENST00000358487 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
FGFR2-206ENST00000358487 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
FGFR2-206ENST00000358487 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
FGFR2-206ENST00000358487 TRIM26Q12899 539 aaPredicted RBP13.25□□□□□ -0.29
FGFR2-206ENST00000358487 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
FGFR2-206ENST00000358487 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
FGFR2-206ENST00000358487 ITGAEP38570 1179 aa13.1□□□□□ -0.31
FGFR2-206ENST00000358487 CCDC180Q9P1Z9 1646 aa13.09□□□□□ -0.31
FGFR2-206ENST00000358487 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
FGFR2-206ENST00000358487 HRCP23327 699 aa13.07□□□□□ -0.32
FGFR2-206ENST00000358487 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
FGFR2-206ENST00000358487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
FGFR2-206ENST00000358487 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
FGFR2-206ENST00000358487 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
FGFR2-206ENST00000358487 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
FGFR2-206ENST00000358487 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
FGFR2-206ENST00000358487 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
FGFR2-206ENST00000358487 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
FGFR2-206ENST00000358487 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
FGFR2-206ENST00000358487 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
FGFR2-206ENST00000358487 P3H3Q8IVL6 736 aa12.77□□□□□ -0.36
FGFR2-206ENST00000358487 FBLN2P98095 1184 aa12.76□□□□□ -0.37
FGFR2-206ENST00000358487 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
FGFR2-206ENST00000358487 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
FGFR2-206ENST00000358487 NACADO15069 1562 aa12.69□□□□□ -0.38
FGFR2-206ENST00000358487 ARID3CA6NKF2 412 aa12.67□□□□□ -0.38
FGFR2-206ENST00000358487 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.39
FGFR2-206ENST00000358487 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
FGFR2-206ENST00000358487 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
FGFR2-206ENST00000358487 DCAF1Q9Y4B6 1507 aa12.63□□□□□ -0.39
FGFR2-206ENST00000358487 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
FGFR2-206ENST00000358487 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
FGFR2-206ENST00000358487 NEFLP07196 543 aa12.59□□□□□ -0.39
FGFR2-206ENST00000358487 BAZ1BQ9UIG0 1483 aaKnown RBP12.47□□□□□ -0.41
FGFR2-206ENST00000358487 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
FGFR2-206ENST00000358487 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.42
FGFR2-206ENST00000358487 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
FGFR2-206ENST00000358487 ZNF326Q5BKZ1 582 aaKnown RBP12.45□□□□□ -0.42
FGFR2-206ENST00000358487 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
FGFR2-206ENST00000358487 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
FGFR2-206ENST00000358487 CLIP1P30622 1438 aa12.41□□□□□ -0.42
FGFR2-206ENST00000358487 CDK11AQ9UQ88 783 aaPredicted RBP12.4□□□□□ -0.43
FGFR2-206ENST00000358487 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
FGFR2-206ENST00000358487 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
FGFR2-206ENST00000358487 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
FGFR2-206ENST00000358487 EEA1Q15075 1411 aa12.35□□□□□ -0.43
FGFR2-206ENST00000358487 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
FGFR2-206ENST00000358487 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
FGFR2-206ENST00000358487 GOLGA3Q08378 1498 aa12.32□□□□□ -0.44
FGFR2-206ENST00000358487 SOGA1O94964 1423 aa12.31□□□□□ -0.44
FGFR2-206ENST00000358487 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
FGFR2-206ENST00000358487 TNIKQ9UKE5 1360 aa12.29□□□□□ -0.44
FGFR2-206ENST00000358487 ANP32CO43423 234 aa12.29□□□□□ -0.44
FGFR2-206ENST00000358487 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
FGFR2-206ENST00000358487 MTUS2Q5JR59 1369 aa12.27□□□□□ -0.44
FGFR2-206ENST00000358487 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
FGFR2-206ENST00000358487 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
FGFR2-206ENST00000358487 ABCC8Q09428 1581 aa12.23□□□□□ -0.45
FGFR2-206ENST00000358487 WIZO95785 1651 aa12.23□□□□□ -0.45
FGFR2-206ENST00000358487 TONSLQ96HA7 1378 aa12.21□□□□□ -0.46
FGFR2-206ENST00000358487 RRP7BPQ9NSQ0 103 aa12.19□□□□□ -0.46
FGFR2-206ENST00000358487 BCANQ96GW7 911 aa12.19□□□□□ -0.46
FGFR2-206ENST00000358487 DDX10Q13206 875 aaKnown RBP12.18□□□□□ -0.46
FGFR2-206ENST00000358487 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
FGFR2-206ENST00000358487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
FGFR2-206ENST00000358487 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
FGFR2-206ENST00000358487 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
FGFR2-206ENST00000358487 CUX2O14529 1486 aa12.16□□□□□ -0.46
FGFR2-206ENST00000358487 CARMIL1Q5VZK9 1371 aa12.15□□□□□ -0.46
FGFR2-206ENST00000358487 HIRIP3Q9BW71 556 aaPredicted RBP12.15□□□□□ -0.46
FGFR2-206ENST00000358487 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
FGFR2-206ENST00000358487 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
FGFR2-206ENST00000358487 ACIN1Q9UKV3 1341 aaKnown RBP12.13□□□□□ -0.47
FGFR2-206ENST00000358487 PLEKHD1A6NEE1 506 aa12.12□□□□□ -0.47
FGFR2-206ENST00000358487 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
FGFR2-206ENST00000358487 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
FGFR2-206ENST00000358487 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
FGFR2-206ENST00000358487 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
FGFR2-206ENST00000358487 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
FGFR2-206ENST00000358487 TDRD9Q8NDG6 1382 aaKnown RBP12.07□□□□□ -0.48
FGFR2-206ENST00000358487 MIER1Q8N108 512 aa12.06□□□□□ -0.48
FGFR2-206ENST00000358487 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
FGFR2-206ENST00000358487 CFDP1Q9UEE9 299 aaPredicted RBP12.06□□□□□ -0.48
FGFR2-206ENST00000358487 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms