Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 AP005435.1-201ENST00000529293 1178 ntBASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM4Q9UKN5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 HYMAI-201ENST00000635591 3347 ntBASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.9■□□□□ 0.78
PRDM4Q9UKN5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PRDM4Q9UKN5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.89■□□□□ 0.78
PRDM4Q9UKN5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM4Q9UKN5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms