Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 SOX15-203ENST00000570788 1093 ntBASIC17.97■□□□□ 0.47
RLIMQ9NVW2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RLIMQ9NVW2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 AL355802.2-201ENST00000402069 882 ntBASIC17.96■□□□□ 0.47
RLIMQ9NVW2 HLA-L-209ENST00000420110 1011 ntBASIC17.96■□□□□ 0.47
RLIMQ9NVW2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 AC120498.8-201ENST00000614275 531 ntBASIC17.96■□□□□ 0.47
RLIMQ9NVW2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 AC104581.1-202ENST00000635932 2618 ntBASIC17.96■□□□□ 0.47
RLIMQ9NVW2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RLIMQ9NVW2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RLIMQ9NVW2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RLIMQ9NVW2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RLIMQ9NVW2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RLIMQ9NVW2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.96■□□□□ 0.46
RLIMQ9NVW2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.95■□□□□ 0.46
RLIMQ9NVW2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 AIRN-201ENST00000601203 4374 ntBASIC17.95■□□□□ 0.46
RLIMQ9NVW2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RLIMQ9NVW2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.94■□□□□ 0.46
RLIMQ9NVW2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.94■□□□□ 0.46
RLIMQ9NVW2 AL121906.2-201ENST00000621597 723 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms