Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 HLA-B-256ENST00000639848 1089 ntBASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIN7CQ9NUP9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LIN7CQ9NUP9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LIN7CQ9NUP9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 KRT18P6-201ENST00000555540 1265 ntBASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 AC060766.5-201ENST00000590539 871 ntBASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LIN7CQ9NUP9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LIN7CQ9NUP9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIN7CQ9NUP9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms