Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 AL645608.8-201ENST00000606034 2086 ntBASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 TREX1-205ENST00000625293 1783 ntBASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CDC42SE1Q9NRR8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms