Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 AC093484.2-201ENST00000580996 2166 ntBASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C12orf4Q9NQ89 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 KRT16P6-202ENST00000425692 1426 ntBASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 AC007322.4-201ENST00000509611 723 ntBASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 PTBP1P-201ENST00000554374 1601 ntBASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C12orf4Q9NQ89 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 FER1L4-210ENST00000615531 5998 ntBASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf4Q9NQ89 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 KRT8P17-201ENST00000453110 1448 ntBASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 AL031963.3-201ENST00000606441 850 ntBASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C12orf4Q9NQ89 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms