Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 LINC01238-205ENST00000567549 1107 ntBASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 GPALPP1-207ENST00000611650 899 ntBASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF1Q9H7N4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 AC007322.3-201ENST00000426526 701 ntBASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 FITM1-202ENST00000559294 800 ntBASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF1Q9H7N4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SCAF1Q9H7N4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC28.64■■■□□ 2.18
SCAF1Q9H7N4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC28.64■■■□□ 2.18
SCAF1Q9H7N4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC28.64■■■□□ 2.18
SCAF1Q9H7N4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
SCAF1Q9H7N4 AC093503.3-201ENST00000624917 2352 ntBASIC28.64■■■□□ 2.18
SCAF1Q9H7N4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC28.64■■■□□ 2.18
SCAF1Q9H7N4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SCAF1Q9H7N4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC28.64■■■□□ 2.17
SCAF1Q9H7N4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC28.64■■■□□ 2.17
SCAF1Q9H7N4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC28.64■■■□□ 2.17
SCAF1Q9H7N4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC28.64■■■□□ 2.17
SCAF1Q9H7N4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC28.64■■■□□ 2.17
SCAF1Q9H7N4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 AL049796.1-201ENST00000565336 1766 ntBASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 AL390719.1-204ENST00000412397 1219 ntBASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 KRT16P5-201ENST00000455284 522 ntBASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC28.63■■■□□ 2.17
SCAF1Q9H7N4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF1Q9H7N4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms