Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.28■■□□□ 1
UBE2OQ9C0C9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.28■■□□□ 1
UBE2OQ9C0C9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.28■■□□□ 1
UBE2OQ9C0C9 CA15P1-201ENST00000481698 905 ntBASIC21.28■■□□□ 1
UBE2OQ9C0C9 AP003041.3-201ENST00000527151 707 ntBASIC21.28■■□□□ 1
UBE2OQ9C0C9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.28■■□□□ 1
UBE2OQ9C0C9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
UBE2OQ9C0C9 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.28■■□□□ 1
UBE2OQ9C0C9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 AC139530.3-201ENST00000620344 690 ntBASIC21.28■■□□□ 1
UBE2OQ9C0C9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
UBE2OQ9C0C9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 TFP1-202ENST00000475455 1573 ntBASIC21.27■■□□□ 1
UBE2OQ9C0C9 AC116351.2-201ENST00000606540 1585 ntBASIC21.27■■□□□ 1
UBE2OQ9C0C9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBE2OQ9C0C9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBE2OQ9C0C9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBE2OQ9C0C9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBE2OQ9C0C9 IFNL4P1-201ENST00000607083 540 ntBASIC21.27■■□□□ 1
UBE2OQ9C0C9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
UBE2OQ9C0C9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
UBE2OQ9C0C9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 AF106564.1-201ENST00000607058 2553 ntBASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 AL031008.1-201ENST00000619963 541 ntBASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 AC005229.4-201ENST00000610085 2198 ntBASIC21.26■□□□□ 0.99
UBE2OQ9C0C9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 EMBP1-201ENST00000458200 901 ntBASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2OQ9C0C9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 TSSC2-201ENST00000450217 709 ntBASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 GCSHP2-201ENST00000560971 527 ntBASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 PLK5-205ENST00000642079 1969 ntBASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.24■□□□□ 0.99
UBE2OQ9C0C9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms