Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.33■□□□□ 0.84
RHOXF2Q9BQY4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 AC096631.2-201ENST00000436136 790 ntBASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 AC106739.1-201ENST00000617035 715 ntBASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF2Q9BQY4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.31■□□□□ 0.84
RHOXF2Q9BQY4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 HTR7P1-202ENST00000624664 4411 ntBASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF2Q9BQY4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.29■□□□□ 0.84
RHOXF2Q9BQY4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms