Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CHCHD1Q96BP2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHCHD1Q96BP2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 KRT125P-201ENST00000546827 989 ntBASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 AC126763.1-201ENST00000552015 2118 ntBASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHCHD1Q96BP2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 AC004987.1-201ENST00000428627 508 ntBASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHCHD1Q96BP2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SLC47A1P1-202ENST00000449666 945 ntBASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms