Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 TFP1-202ENST00000475455 1573 ntBASIC18.55■□□□□ 0.56
VPS33AQ96AX1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS33AQ96AX1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 LSM12P1-201ENST00000411836 588 ntBASIC18.53■□□□□ 0.56
VPS33AQ96AX1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 ZNF815P-204ENST00000434898 1737 ntBASIC18.53■□□□□ 0.56
VPS33AQ96AX1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS33AQ96AX1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 AC005181.1-201ENST00000604782 1256 ntBASIC18.52■□□□□ 0.56
VPS33AQ96AX1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
VPS33AQ96AX1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS33AQ96AX1 AC009113.1-201ENST00000570267 2443 ntBASIC18.52■□□□□ 0.55
VPS33AQ96AX1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS33AQ96AX1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
VPS33AQ96AX1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.52■□□□□ 0.55
VPS33AQ96AX1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS33AQ96AX1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 AL162430.1-201ENST00000480705 870 ntBASIC18.51■□□□□ 0.55
VPS33AQ96AX1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.51■□□□□ 0.55
VPS33AQ96AX1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms