Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.08■□□□□ 0.32
RFT1Q96AA3 CYP2T1P-201ENST00000432607 1285 ntBASIC17.08■□□□□ 0.32
RFT1Q96AA3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.08■□□□□ 0.32
RFT1Q96AA3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.08■□□□□ 0.32
RFT1Q96AA3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.08■□□□□ 0.32
RFT1Q96AA3 RARRES2P6-201ENST00000567333 442 ntBASIC17.08■□□□□ 0.32
RFT1Q96AA3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.08■□□□□ 0.32
RFT1Q96AA3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RFT1Q96AA3 AC105020.6-201ENST00000621523 1217 ntBASIC17.08■□□□□ 0.32
RFT1Q96AA3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFT1Q96AA3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFT1Q96AA3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.08■□□□□ 0.32
RFT1Q96AA3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFT1Q96AA3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.07■□□□□ 0.32
RFT1Q96AA3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 KRT8P17-201ENST00000453110 1448 ntBASIC17.07■□□□□ 0.32
RFT1Q96AA3 FZD10-202ENST00000539839 3282 ntBASIC17.07■□□□□ 0.32
RFT1Q96AA3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.07■□□□□ 0.32
RFT1Q96AA3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFT1Q96AA3 AC026271.2-201ENST00000428091 497 ntBASIC17.07■□□□□ 0.32
RFT1Q96AA3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.07■□□□□ 0.32
RFT1Q96AA3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFT1Q96AA3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.07■□□□□ 0.32
RFT1Q96AA3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RFT1Q96AA3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 AL133373.2-201ENST00000623187 2828 ntBASIC17.06■□□□□ 0.32
RFT1Q96AA3 KRT18P68-201ENST00000392293 1000 ntBASIC17.06■□□□□ 0.32
RFT1Q96AA3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.06■□□□□ 0.32
RFT1Q96AA3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFT1Q96AA3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 BID-214ENST00000617586 542 ntTSL 5 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.05■□□□□ 0.32
RFT1Q96AA3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFT1Q96AA3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RFT1Q96AA3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFT1Q96AA3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RFT1Q96AA3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFT1Q96AA3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFT1Q96AA3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFT1Q96AA3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFT1Q96AA3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFT1Q96AA3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.04■□□□□ 0.32
RFT1Q96AA3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFT1Q96AA3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFT1Q96AA3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.04■□□□□ 0.32
RFT1Q96AA3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFT1Q96AA3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFT1Q96AA3 AC006015.1-201ENST00000429970 570 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms