Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 AP001412.1-201ENST00000608405 714 ntBASIC20.59■□□□□ 0.89
DDX1Q92499 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX1Q92499 AL023875.1-201ENST00000640777 796 ntBASIC20.59■□□□□ 0.89
DDX1Q92499 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
DDX1Q92499 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
DDX1Q92499 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX1Q92499 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.58■□□□□ 0.89
DDX1Q92499 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
DDX1Q92499 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX1Q92499 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX1Q92499 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DDX1Q92499 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
DDX1Q92499 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
DDX1Q92499 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX1Q92499 C1QL1P1-201ENST00000568105 661 ntBASIC20.58■□□□□ 0.89
DDX1Q92499 AC133561.5-201ENST00000635547 218 ntBASIC20.58■□□□□ 0.89
DDX1Q92499 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX1Q92499 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX1Q92499 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX1Q92499 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX1Q92499 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
DDX1Q92499 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX1Q92499 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
DDX1Q92499 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DDX1Q92499 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
DDX1Q92499 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX1Q92499 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DDX1Q92499 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX1Q92499 AL161938.1-201ENST00000569833 2180 ntBASIC20.56■□□□□ 0.88
DDX1Q92499 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
DDX1Q92499 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
DDX1Q92499 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX1Q92499 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
DDX1Q92499 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX1Q92499 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX1Q92499 AC124016.1-201ENST00000609552 612 ntBASIC20.56■□□□□ 0.88
DDX1Q92499 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX1Q92499 HLA-A-209ENST00000638375 975 ntBASIC20.56■□□□□ 0.88
DDX1Q92499 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX1Q92499 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX1Q92499 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX1Q92499 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
DDX1Q92499 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX1Q92499 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX1Q92499 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
DDX1Q92499 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
DDX1Q92499 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX1Q92499 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX1Q92499 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
DDX1Q92499 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.55■□□□□ 0.88
DDX1Q92499 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
DDX1Q92499 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 KRASP1-201ENST00000407852 552 ntBASIC20.55■□□□□ 0.88
DDX1Q92499 AC133681.1-201ENST00000465482 601 ntBASIC20.55■□□□□ 0.88
DDX1Q92499 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.55■□□□□ 0.88
DDX1Q92499 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX1Q92499 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms