Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 KRT8P36-201ENST00000489121 1440 ntBASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 AL161938.1-201ENST00000569833 2180 ntBASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 AC073592.3-201ENST00000625118 1834 ntBASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CROCCP3Q8IVE0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 MST1L-201ENST00000442552 2185 ntBASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CROCCP3Q8IVE0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 IGHV3-19-201ENST00000521488 291 ntBASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms