Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 AL136116.3-201ENST00000402907 1138 ntBASIC16.03■□□□□ 0.16
ZNF546Q86UE3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 AC141586.3-201ENST00000562166 1838 ntBASIC16.03■□□□□ 0.16
ZNF546Q86UE3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 UNC93B3-201ENST00000308076 687 ntBASIC16.02■□□□□ 0.16
ZNF546Q86UE3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.02■□□□□ 0.16
ZNF546Q86UE3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF546Q86UE3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF546Q86UE3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 TSPY26P-201ENST00000476365 1326 ntBASIC16.01■□□□□ 0.15
ZNF546Q86UE3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 AL136162.1-201ENST00000607711 1078 ntBASIC16.01■□□□□ 0.15
ZNF546Q86UE3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
ZNF546Q86UE3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16■□□□□ 0.15
ZNF546Q86UE3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16■□□□□ 0.15
ZNF546Q86UE3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF546Q86UE3 AC009053.2-201ENST00000563701 2365 ntBASIC16■□□□□ 0.15
ZNF546Q86UE3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms