Protein–RNA interactions for Protein: Q71SY5

MED25, Mediator of RNA polymerase II transcription subunit 25, humanhuman

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED25Q71SY5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MED25Q71SY5 AFG3L1P-217ENST00000557444 2447 ntBASIC18.25■□□□□ 0.51
MED25Q71SY5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.25■□□□□ 0.51
MED25Q71SY5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MED25Q71SY5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MED25Q71SY5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MED25Q71SY5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MED25Q71SY5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.25■□□□□ 0.51
MED25Q71SY5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MED25Q71SY5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MED25Q71SY5 TREX1-205ENST00000625293 1783 ntBASIC18.25■□□□□ 0.51
MED25Q71SY5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
MED25Q71SY5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
MED25Q71SY5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MED25Q71SY5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 ARMC10P1-201ENST00000313754 855 ntBASIC18.24■□□□□ 0.51
MED25Q71SY5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
MED25Q71SY5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.24■□□□□ 0.51
MED25Q71SY5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
MED25Q71SY5 KRT18P35-201ENST00000510488 1269 ntBASIC18.24■□□□□ 0.51
MED25Q71SY5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.24■□□□□ 0.51
MED25Q71SY5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.24■□□□□ 0.51
MED25Q71SY5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.24■□□□□ 0.51
MED25Q71SY5 AP005242.2-201ENST00000580065 1175 ntBASIC18.24■□□□□ 0.51
MED25Q71SY5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.24■□□□□ 0.51
MED25Q71SY5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MED25Q71SY5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.24■□□□□ 0.51
MED25Q71SY5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MED25Q71SY5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.23■□□□□ 0.51
MED25Q71SY5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MED25Q71SY5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.23■□□□□ 0.51
MED25Q71SY5 SLC25A3P1-201ENST00000443844 931 ntBASIC18.23■□□□□ 0.51
MED25Q71SY5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.23■□□□□ 0.51
MED25Q71SY5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.23■□□□□ 0.51
MED25Q71SY5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MED25Q71SY5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MED25Q71SY5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
MED25Q71SY5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MED25Q71SY5 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.22■□□□□ 0.51
MED25Q71SY5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MED25Q71SY5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MED25Q71SY5 TERF1P1-201ENST00000311003 1181 ntBASIC18.22■□□□□ 0.51
MED25Q71SY5 MESTP1-201ENST00000404287 994 ntBASIC18.22■□□□□ 0.51
MED25Q71SY5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.22■□□□□ 0.51
MED25Q71SY5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.22■□□□□ 0.51
MED25Q71SY5 B3GAT3P1-201ENST00000471720 806 ntBASIC18.22■□□□□ 0.51
MED25Q71SY5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.22■□□□□ 0.51
MED25Q71SY5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.22■□□□□ 0.51
MED25Q71SY5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.22■□□□□ 0.51
MED25Q71SY5 AL160286.2-201ENST00000567150 934 ntBASIC18.22■□□□□ 0.51
MED25Q71SY5 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.22■□□□□ 0.51
MED25Q71SY5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
MED25Q71SY5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
MED25Q71SY5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MED25Q71SY5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.22■□□□□ 0.51
MED25Q71SY5 AC125437.2-201ENST00000625180 2167 ntBASIC18.21■□□□□ 0.51
MED25Q71SY5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MED25Q71SY5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MED25Q71SY5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MED25Q71SY5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MED25Q71SY5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MED25Q71SY5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MED25Q71SY5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms