Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.59■□□□□ 0.41
CXCR4P61073 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 ABALON-201ENST00000629058 1903 ntBASIC17.59■□□□□ 0.41
CXCR4P61073 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 AC013268.1-206ENST00000638368 961 ntBASIC17.59■□□□□ 0.41
CXCR4P61073 AC112229.1-201ENST00000639295 961 ntBASIC17.59■□□□□ 0.41
CXCR4P61073 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CXCR4P61073 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CXCR4P61073 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CXCR4P61073 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCR4P61073 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CXCR4P61073 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.59■□□□□ 0.41
CXCR4P61073 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.59■□□□□ 0.41
CXCR4P61073 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.58■□□□□ 0.41
CXCR4P61073 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CXCR4P61073 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CXCR4P61073 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.58■□□□□ 0.41
CXCR4P61073 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CXCR4P61073 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
CXCR4P61073 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCR4P61073 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCR4P61073 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCR4P61073 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CXCR4P61073 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CXCR4P61073 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCR4P61073 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.58■□□□□ 0.4
CXCR4P61073 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CXCR4P61073 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 AC007322.4-201ENST00000509611 723 ntBASIC17.58■□□□□ 0.4
CXCR4P61073 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CXCR4P61073 NTF6G-201ENST00000591094 616 ntBASIC17.58■□□□□ 0.4
CXCR4P61073 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CXCR4P61073 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CXCR4P61073 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.58■□□□□ 0.4
CXCR4P61073 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.58■□□□□ 0.4
CXCR4P61073 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCR4P61073 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.57■□□□□ 0.4
CXCR4P61073 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CXCR4P61073 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CXCR4P61073 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.57■□□□□ 0.4
CXCR4P61073 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CXCR4P61073 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCR4P61073 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CXCR4P61073 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CXCR4P61073 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CXCR4P61073 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CXCR4P61073 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CXCR4P61073 IRX1P1-201ENST00000438849 1838 ntBASIC17.56■□□□□ 0.4
CXCR4P61073 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms