Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX16P57768 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX16P57768 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX16P57768 AC093484.2-201ENST00000580996 2166 ntBASIC20.39■□□□□ 0.85
SNX16P57768 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX16P57768 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX16P57768 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SNX16P57768 AC104417.2-201ENST00000562989 1793 ntBASIC20.39■□□□□ 0.85
SNX16P57768 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX16P57768 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.38■□□□□ 0.85
SNX16P57768 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SNX16P57768 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX16P57768 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX16P57768 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SNX16P57768 AL160286.2-201ENST00000567150 934 ntBASIC20.38■□□□□ 0.85
SNX16P57768 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX16P57768 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX16P57768 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.38■□□□□ 0.85
SNX16P57768 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SNX16P57768 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX16P57768 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX16P57768 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SNX16P57768 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.37■□□□□ 0.85
SNX16P57768 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX16P57768 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX16P57768 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SNX16P57768 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX16P57768 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 NIFKP9-201ENST00000419265 221 ntBASIC20.37■□□□□ 0.85
SNX16P57768 GCSHP5-201ENST00000443090 522 ntBASIC20.37■□□□□ 0.85
SNX16P57768 AL158047.1-201ENST00000445918 881 ntBASIC20.37■□□□□ 0.85
SNX16P57768 KSR1P1-201ENST00000446298 240 ntBASIC20.37■□□□□ 0.85
SNX16P57768 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX16P57768 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX16P57768 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SNX16P57768 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX16P57768 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX16P57768 AP001412.1-201ENST00000608405 714 ntBASIC20.37■□□□□ 0.85
SNX16P57768 AL445675.2-201ENST00000620291 557 ntBASIC20.37■□□□□ 0.85
SNX16P57768 AC131212.4-201ENST00000623606 975 ntBASIC20.37■□□□□ 0.85
SNX16P57768 HLA-A-209ENST00000638375 975 ntBASIC20.37■□□□□ 0.85
SNX16P57768 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX16P57768 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SNX16P57768 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SNX16P57768 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX16P57768 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX16P57768 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SNX16P57768 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX16P57768 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.36■□□□□ 0.85
SNX16P57768 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX16P57768 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SNX16P57768 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX16P57768 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX16P57768 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.36■□□□□ 0.85
SNX16P57768 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX16P57768 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
SNX16P57768 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SNX16P57768 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX16P57768 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms